Chin-Sheng Yu

Chin-Sheng Yu

Associate Professor

Mail

Education：

  • 交通大學 生物科技系 博士
  • 清華大學 生命科學系 碩士
  • 東吳大學 微生物學系 學士

Research Interest：

  • Bioinformatics
  • Structural Bioinformatics
  • Computational Systems Biology
  1. Lu CH, Chen CC, Yu CS, Liu YY, Liu JJ, Wei ST, Lin YF*, "MIB2: metal ion-binding site prediction and modeling server," Bioinformatics, 15;38(18):4428-4429; doi: 10.1093/bioinformatics/btac534, 2022-07. (SCIE)
  2. Lu CH, Wei ST, Liu JJ, Chang YJ, Lin YF, Yu CS and Chang Sunny LY*, "Recognition of a Novel Gene Signature for Human Glioblastoma," International Journal of Molecular Sciences, 23(8), pp. 4157; DOI:10.3390/ijms23084157, 2022-04. (SCIE)
  3. Lin YF, Liu JJ, Chang YJ, Yu CS, Yi W, Lane HY, Lu CH*, "Predicting Anticancer Drug Resistance Mediated by Mutations," Pharmaceuticals, https://doi.org/10.3390/ph15020136, 2022-01. (SCIE)
  4. Lee IC, Yu CS, Wong SH, and Lue, KH, "Troponin I Levels in Neonatal Hypoxic-Ischemic Encephalopathy Are Related to Cardiopulmonary Comorbidity and Neurodevelopmental Outcomes," Journal of Clinical Medicine, 10.3390/jcm10174010, 2021-09. (SCIE)
  5. Liu JJ, Yu CS, Wu HW, Chang YJ, Lin CP, and Lu CH, "The structure-based cancer-related single amino acid variation prediction," Scientific Reports, Scientific Reports volume 11, Article number: 13599, 2021-06. (SCIE)
  6. Lee IC, Wong SH, Wang XA, and Yu CS, "Identifying Early Diagnostic Biomarkers Associated with Neonatal Hypoxic-Ischemic Encephalopathy," Diagnostics, Diagnostics 2021, 11(5), 897; https://doi.org/10.3390/diagnostics11050897, 2021-05. (SCIE)
  7. Lin YF, Cheng CW, Shih CS, Hwang JK, Yu CS, and Lu CH*, "MIB: Metal Ion-Binding site prediction and docking server," Journal of Chemical Information and Modeling, vol. 56 (12), pp 2287–2291 (DOI:10.1021/acs.jcim.6b00407), 2016-11. (SCIE)
  8. Tsay J-J, Su S-C†* and Yu C-S†*(†:equal contribution), "A Multi-Objective Approach for Protein Structure Prediction Based on an Energy Model and Backbone Angle Preferences," International Journal of Molecular Sciences, 16(7),pp.15136-15149, 2015-07. (SCIE)
  9. Lu C-H§*, Yu C-S§, Lin Y-F and Chen J-Y.(§:equal contribution), "Predicting Flavin- and Nicotinamide Adenine Dinucleotide–Binding Sites in Proteins Using the Fragment Transformation Method," BioMed Research Interactional, 2015,pp.402536, 2015-04. (SCIE)
  10. Lu C-H, Yu C-S, Chien Y-T, and Huang S-W*, "EXIA2: Web Server of Accurate and Rapid Protein Catalytic Residue Prediction," BioMed Research International, 2014,pp.807839, 2014-11. (SCIE)
  11. Yu C-S, Cheng C-W, Su W-C, Chang K-C, Huang S-W, Hwang J-K, and Lu C-H*., "CELLO2GO: A Web Server for Protein subCELlular LOcalization Prediction with Functional Gene Ontology Annotation," PLoS ONE, 9, PP.e99368, 2014-06. (SCIE)
  12. Lin Y.-C.*, Yu C.-S. and Lin Y.-J., "Enabling Large-Scale Biomedical Analysis in the Cloud," BioMed Research International, 2013,pp.185679, 2013-11. (SCIE)
  13. Lu CH*, Lin YF, Lin JJ, and Yu CS, "Prediction of Metal Ion-Binding Sites in Proteins using the Fragment Transformation Method.," PLoS ONE, 7, PP. e39252, 2012-06. (SCIE)
  14. Yu CS* and Lu CH, "Identification of Antifreeze Proteins and Their Functional Residues by Support Vector Machine and Genetic Algorithms based on n-Peptide Compositions," PLoS ONE, 6, PP. e20445, 2011-05. (SCIE)
  15. Tsai SS, Yu CS, Chung WB, Pai HC, Liu YL, Liu HJ, Lin MY, Hsieh YC, Cheng LT, and Chuang KP*, "Molecular Cloning and Structural Characterization of the Porcine TLR4 Ectodomain," Taiwan Vet J, 36, PP. 261~268, 2010-08.
  16. Lu CH, Chen YC, Yu CS, Hwang JK*, "Predicting disulfide connectivity patterns," Proteins: Structure, Function and Bioinformatics, 67, PP. 262~270, 2007-05. (SCIE)
  17. Yu CS, Chen YC, Lu CH, Hwang JK*, "Prediction of protein subcellular localization," Proteins: Sturcture, Function and Bioinformatics, 64, PP. 643~651, 2006-08. (SCIE)
  18. Lu CH, Lin SH, Chen YC, Yu CS, Chang SY, Hwang JK*, "The fragment transformation method to detect the protein structural motifs," Proteins: Sturcture, Function and Bioinformatics, 63, PP. 636~643, 2006-05. (SCIE)
  19. Yu CS, Lin CJ, Hwang JK*, "Predicting Subcellular Localization of Proteins For Gram-Negative Bacteria by Support Vector Machines Based on n-Peptide Compositions," Protein Science, 13, PP. 1402~1406, 2004-05. (SCIE)
  20. Yu CS, Wang JY, Yang JM, Lyu PC, Lin CJ, Hwang JK*, "Fine-grained protein fold assignment by support vector machines using generalized n-peptide coding schemes and jury voting from multiple parameter sets," Proteins: Structure, Function and Genetics, 50, PP. 531~536, 2003-05. (SCIE)
  1. Kuei-Chung Chang, Hung Yu Chen, Shih-Hong Lin and Chin-Sheng Yu,"Design of River Monitoring System Based on Video Recognition and Deep Learning Technologies ," 2020 IEEE International Conference on Consumer Electronics (ICCE-Taiwan), TBD, 2020-09. South Garden Hotels and Resorts .
  2. Kuei-Chung Chang, Hung Yu Chen, Shing-Yu Yeh and Chin-Sheng Yu,"Using Deep Learning Approaches to Predict Indoor Thermal and Outdoor Rainfall Probability by Embedded Weather Box ," IEEE International Conference on Consumer Electronics - Taiwan (ICCE-TW 2018), TBD, 2018-05. NATIONAL CHUNG HSING UNIVERSITY .
  3. Kuei-Chung Chang*, Liu Po-Kai and Chin-Sheng Yu,"Design of Real-time Video Streaming and Object Tracking System for Home Care Services ," 2016 IEEE International Conference on Consumer Electronics-Taiwan, TBD, 2016-05. Nantou .
  4. Kuei-Chung Chang*, Chin-Sheng Yu, and Yang-Ching Su,"Enhancing Performance of NUCA by Bank Sharing Mechanism ," IEEE Symposium on Low-Power and High-Speed Chips, TBD, 2016-04. Japan .
  5. 徐筱姍,游景盛*,"人類蛋白質在細胞內位置的預測 ," TANET2013(台灣網際網路研討會), p.201, 2013-10. 中興大學 .
  6. Yu Chin-Sheng* and Hwang Jenn-Kang,"Prediction of Protein Subcellular Localization ," IEEE 8th International Conference on Intelligent System and Applications (ISDA), vol.1: pp.165-170, 2008-11. Kaohsiung, Taiwan .
  7. Chu Yen-Wei*, Yu Chin-Sheng and Ng Hui-Fuang,"Protein Secondary Structures Prediction Using Data Fusion Approach ," The 7th IEEE World Congress on Intelligent Control and Automation (WCICA), vol.4, pp.1885-1890, 2008-06. Chongqing,China .
  1. 植基於區塊鏈之音訊傳輸技術/2017-07~2018-02/ 106-2813-C-035-080-E/主持人
  2. 抗凍蛋白質與冰結合區之研究/2012-08~2013-07/ NSC101-2113-M-035-002-/主持人
  3. 藥物及其標的蛋白質分子交互作用之計算及分析 - 由細胞的定位系統討論其功能與反應路徑的關係(1/2)/2015-08~2016-07/ MOST104-2221-E-035-056-MY2/主持人
  4. 藥物及其標的蛋白質分子交互作用之計算及分析 - 由細胞的定位系統討論其功能與反應路徑的關係(2/2)/2016-08~2017-07/ MOST104-2221-E-035-056-MY2/主持人
  5. 生物系統內分子交互作用及生化路徑之大規模分析-(子計畫四)蛋白質於細胞位置之預測與•••:由基因體序列到蛋白質功能(2/3)/2009-08~2010-07/ NSC98-2627-B-035-001-/主持人
  6. 生物系統內分子交互作用及生化路徑之大規模分析-(子計畫四)蛋白質於細胞位置之預測與蛋白質間的交互作用:由基因體序列到•(1/3)/2008-08~2009-07/ NSC97-2627-B-035-001-/主持人
  7. 生物系統內分子交互作用及生化路徑之大規模分析-(子計畫四)蛋白質於細胞位置之預測與蛋白質間的交互作用:由基因體序列到...(3/3)/2010-08~2011-07/ NSC99-2627-B-035-001-/主持人
  1. 98B2(自動化預測蛋白質改造位置平台之建立)/2009-01~2009-12/ 主持人
  2. 98B2(建立系統化預測和改造蛋白質特性之技術平台-電腦模擬平台)/2010-01~2010-12/ 主持人
  1. 111/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2022-11-15/The structure-based cancer-related single amino acid variation prediction
  2. 111/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2022-11-15/Identifying Early Diagnostic Biomarkers Associated with Neonatal Hypoxic-Ischemic Encephalopathy
  3. 111/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2022-11-15/Troponin I Levels in Neonatal Hypoxic-Ischemic Encephalopathy Are Related to Cardiopulmonary Comorbidity and Neurodevelopmental Outcomes
  4. 106/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2017-11-15/MIB: Metal Ion-Binding site prediction and docking server
  5. 105/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2016-11-15/A Multi-Objective Approach for Protein Structure Prediction Based on an Energy Model and Backbone Angle Preferences
  6. 105/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2016-11-15/Predicting Flavin- and Nicotinamide Adenine Dinucleotide–Binding Sites in Proteins Using the Fragment Transformation Method
  7. 104/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2015-11-15/EXIA2: Web Server of Accurate and Rapid Protein Catalytic Residue Prediction
  8. 104/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2015-11-15/CELLO2GO: A Web Server for Protein subCELlular LOcalization Prediction with Functional Gene Ontology Annotation
  9. 103/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2014-11-15/Enabling Large-Scale Biomedical Analysis in the Cloud
  10. 102/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2013-11-15/Prediction of Metal Ion-Binding Sites in Proteins using the Fragment Transformation Method.
  11. 101/101學年度優良導師/逢甲大學/ 2013-08-15/
  12. 101/逢甲大學論文著作獎勵傑出獎/逢甲大學/ 2012-11-15/Identification of Antifreeze Proteins and Their Functional Residues by Support Vector Machine and Genetic Algorithms based on n-Peptide Compositions
  1. Prediction of Protein Subcellular Localization/慈濟大學醫學資訊系/2009-12
  2. Prediction of Protein Subcellular Localization/陽明大學生物醫學資訊研究所/2009-12
  3. Prediction of Protein Subcellular Localization/嘉南藥理科技大學資訊管理系/2009-11
  4. Prediction of Subcellular Localization/中華大學生物資訊學系/2008-11
Last update：2024-12-22, 9:02 a.m. Next update：2024-12-23, 9 a.m.